Antigen

Antigen Class

TFs and others

Antigen

Gata4

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

age

unknown

sample type

tissue

tissue

liver

sex

not collected

health state

healthy

dev stage

adult

donor ID

ENCDO221RVN

lab

Ross Hardison, PennState

source

Gerd Blobel

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

general protocol: https://www.encodeproject.org/documents/f9af0ef6-16a4-42a0-9bd0-4c956c4f19fb/@@download/attachment/TruSeq_ChIP_SamplePrep_Guide_15023092_A.pdf

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

47628890

Reads aligned (%)

93.3

Duplicates removed (%)

23.8

Number of peaks

21168 (qval < 1E-05)

mm9

Number of total reads

47628890

Reads aligned (%)

93.0

Duplicates removed (%)

23.7

Number of peaks

21169 (qval < 1E-05)